Circos plotting scripts

This Circos package contains scripts that will help you to generate your own circular genome-wide plots from Complete Genomics data (similar to what is provided in the assembly v2.0 release).

The user has options to plot single normal genomes, single tumor genomes, and tumor-normal pairs with additional tracks to help visualize interchromosal junctions, information on loss of heterozygosity, somatic mutations, and impacted genes.

Download the tool here.